Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus alkaliphilus |
| Strain | strain DSM 22703 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1387136 bp
Thymine Count
1393756 bp
Guanine Count
1030358 bp
Cytosine Count
1036482 bp
Genome Length
4853787 bp
Protein-coding Genes
4334 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN03080617_02637 | Not Available | Negative | 2902885 - 2903307 | 15891.0 |
| pas domain s-box-containing protein | SAMN03080617_02638 | Not Available | Negative | 2903316 - 2908433 | 194601.0 |
| pas domain s-box-containing protein | SAMN03080617_02639 | Not Available | Negative | 2908502 - 2909101 | 23046.5 |
| methionyl-trna synthetase | SAMN03080617_02640 | Not Available | Negative | 2909848 - 2911908 | 77819.1 |
| transcriptional regulator, tetr family | SAMN03080617_02641 | Not Available | Negative | 2912006 - 2912638 | 23874.0 |
| fr47-like protein | SAMN03080617_02642 | Not Available | Negative | 2912699 - 2913385 | 25156.5 |
| dna ligase (nad+) | SAMN03080617_02643 | Not Available | Positive | 2913764 - 2916217 | 92214.7 |
| uncharacterized conserved protein | SAMN03080617_02644 | Not Available | Positive | 2916348 - 2917355 | 38918.6 |
| histidine kinase | SAMN03080617_02645 | Not Available | Positive | 2917485 - 2918267 | 29344.9 |
| dna-binding response regulator, lytr/algr family | SAMN03080617_02646 | Not Available | Positive | 2918251 - 2918970 | 27311.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
