Algoriphagus alkaliphilus strain DSM 22703

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus alkaliphilus strain DSM 22703 is a Gram-negative, rod-shaped bacterium. This strain is characterized by having a single replicon, which indicates a streamlined genetic organization. The genomic information for this bacterium can be accessed through the accession number FMXE00000000.1, providing a resource for researchers interested in its genetic makeup and potential applications. As a member of the genus Algoriphagus, A. alkaliphilus is likely to inhabit alkaline environments, which may include soda lakes or other high-pH habitats. The adaptation to such extreme conditions suggests that this bacterium possesses unique metabolic pathways that enable it to thrive where many other organisms cannot. Its physiological traits may contribute to biogeochemical cycles in these specific ecosystems, influencing nutrient availability and microbial community dynamics. Overall, the study of Algoriphagus alkaliphilus DSM 22703 can provide insights into microbial life in alkaline conditions, which is essential for understanding biodiversity and ecological interactions in such environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus alkaliphilus
Strainstrain DSM 22703

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus alkaliphilus strain DSM 22703 genome assembly,

Gene Summary

Adenine Count

1387136 bp

Thymine Count

1393756 bp

Guanine Count

1030358 bp

Cytosine Count

1036482 bp

Genome Length

4853787 bp

Protein-coding Genes

4334 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein of unknown functionSAMN03080617_02536Not AvailablePositive2785895 - 278673431929.8
uncharacterized conserved protein ycii, contains a putative active-site phosphohistidineSAMN03080617_02537Not AvailablePositive2786746 - 278720116744.5
pd-(d/e)xk nuclease superfamily proteinSAMN03080617_02538Not AvailableNegative2787751 - 2790615111460.0
atp-dependent exodnase (exonuclease v) beta subunit (contains helicase and exonuclease domains)SAMN03080617_02539Not AvailableNegative2790608 - 2793820122982.0
alpha-glucuronidaseSAMN03080617_02540Not AvailablePositive2793974 - 279613382007.3
catechol 2,3-dioxygenaseSAMN03080617_02541Not AvailablePositive2796331 - 279681617942.4
protein of unknown functionSAMN03080617_02542Not AvailablePositive2796914 - 279728814454.3
lysophospholipase, alpha-beta hydrolase superfamilySAMN03080617_02543Not AvailableNegative2797424 - 279826031058.8
cubico group peptidase, beta-lactamase class c familySAMN03080617_02544Not AvailablePositive2798315 - 279951744679.4
hypothetical proteinSAMN03080617_02545Not AvailableNegative2799654 - 27997765018.26

Displaying genes 2531 – 2540 of 4380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.