Algoriphagus alkaliphilus strain DSM 22703

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus alkaliphilus strain DSM 22703 is a Gram-negative, rod-shaped bacterium. This strain is characterized by having a single replicon, which indicates a streamlined genetic organization. The genomic information for this bacterium can be accessed through the accession number FMXE00000000.1, providing a resource for researchers interested in its genetic makeup and potential applications. As a member of the genus Algoriphagus, A. alkaliphilus is likely to inhabit alkaline environments, which may include soda lakes or other high-pH habitats. The adaptation to such extreme conditions suggests that this bacterium possesses unique metabolic pathways that enable it to thrive where many other organisms cannot. Its physiological traits may contribute to biogeochemical cycles in these specific ecosystems, influencing nutrient availability and microbial community dynamics. Overall, the study of Algoriphagus alkaliphilus DSM 22703 can provide insights into microbial life in alkaline conditions, which is essential for understanding biodiversity and ecological interactions in such environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus alkaliphilus
Strainstrain DSM 22703

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus alkaliphilus strain DSM 22703 genome assembly,

Gene Summary

Adenine Count

1387136 bp

Thymine Count

1393756 bp

Guanine Count

1030358 bp

Cytosine Count

1036482 bp

Genome Length

4853787 bp

Protein-coding Genes

4334 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ring-1,2-phenylacetyl-coa epoxidase subunit paaeSAMN03080617_01008Not AvailableNegative1135785 - 113688841156.7
adenylosuccinate lyaseSAMN03080617_01009Not AvailablePositive1137112 - 113845550648.9
peptidylprolyl isomeraseSAMN03080617_01010Not AvailableNegative1138640 - 113906515218.4
dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domainsSAMN03080617_01011Not AvailablePositive1139248 - 114063052302.4
histidine kinase-, dna gyrase b-, and hsp90-like atpaseSAMN03080617_01012Not AvailablePositive1140620 - 114196350622.0
cytochrome c nitrite reductase small subunitSAMN03080617_01013Not AvailablePositive1142231 - 114292026204.4
nitrite reductase (cytochrome c-552)SAMN03080617_01014Not AvailablePositive1142922 - 114441556137.2
alginate exportSAMN03080617_01015Not AvailablePositive1144428 - 114574750591.7
cytochrome c-type biogenesis protein ccsbSAMN03080617_01016Not AvailablePositive1145771 - 1148875117090.0
dolichyl-phosphate-mannose-protein mannosyltransferaseSAMN03080617_01017Not AvailablePositive1149383 - 115091259189.7

Displaying genes 1011 – 1020 of 4380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.