Sphingomonas sp. NFR15

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. NFR15 is a rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. This motility can be crucial for its adaptation to various environments and its ability to colonize different niches. The organism has a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and maintenance of its genomic integrity. The accession number for Sphingomonas sp. NFR15 is FMWX00000000.1, which serves as a reference for its genomic data within biological databases. This unique identifier allows researchers to access specific genetic information about the strain, which can be essential for understanding its physiological and ecological roles. In terms of its biological and ecological significance, Sphingomonas species are known for their ability to degrade a variety of environmental pollutants. This trait suggests that Sphingomonas sp. NFR15 may play a role in bioremediation processes, contributing to the detoxification of contaminated environments. The combination of its motility and genetic characteristics may enhance its effectiveness in seeking out and degrading pollutants, highlighting the potential of this bacterium in environmental microbiology and biotechnology applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. NFR15
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. NFR15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. NFR15 genome assembly, contig:

Gene Summary

Adenine Count

729839 bp

Thymine Count

723113 bp

Guanine Count

1464167 bp

Cytosine Count

1481546 bp

Genome Length

4398675 bp

Protein-coding Genes

3983 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant)SAMN03159340_00342Not AvailableNegative374237 - 37564650800.1
acetylornithine deacetylaseSAMN03159340_00343Not AvailableNegative376149 - 37731541129.1
efflux transporter, outer membrane factor (omf) lipoprotein, nodt familySAMN03159340_00344Not AvailableNegative377365 - 37884651844.4
mfs transporter, dha2 family, multidrug resistance proteinSAMN03159340_00345Not AvailableNegative378843 - 38044157146.4
membrane fusion protein, multidrug efflux systemSAMN03159340_00346Not AvailableNegative380444 - 38160441001.4
predicted flavoprotein czco associated with the cation diffusion facilitator czcdSAMN03159340_00347Not AvailableNegative381932 - 38339253195.0
translocation and assembly module tambSAMN03159340_00348Not AvailableNegative383434 - 387693146246.0
translocation and assembly module tamaSAMN03159340_00349Not AvailableNegative387693 - 38972371433.1
hypothetical proteinSAMN03159340_00350Not AvailableNegative389993 - 39047215709.6
hypothetical proteinSAMN03159340_00351Not AvailableNegative390469 - 39082212068.5

Displaying genes 431 – 440 of 4086 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.