Sphingomonas sp. NFR15

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. NFR15 is a rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. This motility can be crucial for its adaptation to various environments and its ability to colonize different niches. The organism has a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and maintenance of its genomic integrity. The accession number for Sphingomonas sp. NFR15 is FMWX00000000.1, which serves as a reference for its genomic data within biological databases. This unique identifier allows researchers to access specific genetic information about the strain, which can be essential for understanding its physiological and ecological roles. In terms of its biological and ecological significance, Sphingomonas species are known for their ability to degrade a variety of environmental pollutants. This trait suggests that Sphingomonas sp. NFR15 may play a role in bioremediation processes, contributing to the detoxification of contaminated environments. The combination of its motility and genetic characteristics may enhance its effectiveness in seeking out and degrading pollutants, highlighting the potential of this bacterium in environmental microbiology and biotechnology applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. NFR15
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. NFR15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. NFR15 genome assembly, contig:

Gene Summary

Adenine Count

729839 bp

Thymine Count

723113 bp

Guanine Count

1464167 bp

Cytosine Count

1481546 bp

Genome Length

4398675 bp

Protein-coding Genes

3983 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
precorrin-2/cobalt-factor-2 c20-methyltransferaseSAMN03159340_00022Not AvailablePositive24983 - 2570826110.6
precorrin-3b c17-methyltransferaseSAMN03159340_00023Not AvailablePositive25705 - 2644826129.5
precorrin-6a reductaseSAMN03159340_00024Not AvailableNegative26424 - 2717325939.5
precorrin-6y c5,15-methyltransferase (decarboxylating)SAMN03159340_00025Not AvailablePositive27199 - 2838041654.1
cobalt-precorrin 5a hydrolaseSAMN03159340_00026Not AvailablePositive28377 - 2874211909.5
precorrin-4/cobalt-precorrin-4 c11-methyltransferaseSAMN03159340_00027Not AvailablePositive28739 - 2952427123.7
hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)SAMN03159340_00028Not AvailablePositive29521 - 3083446254.2
precorrin-6a synthase (deacetylating)SAMN03159340_00029Not AvailablePositive30831 - 3159227232.2
iron complex outermembrane recepter proteinSAMN03159340_00031Not AvailablePositive32119 - 3427577332.9
high-affinity nickel-transport proteinSAMN03159340_00032Not AvailablePositive34486 - 3552937119.9

Displaying genes 111 – 120 of 4086 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.