Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Epibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Epibacterium |
| Species | Epibacterium ulvae |
| Strain | strain U95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935133 bp
Thymine Count
950131 bp
Guanine Count
1071311 bp
Cytosine Count
1037494 bp
Genome Length
3994069 bp
Protein-coding Genes
3836 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit delta | SAMN04488118_102455 | Not Available | Positive | 965494 - 965823 | 12492.6 |
| sarcosine oxidase subunit alpha | SAMN04488118_102456 | Not Available | Positive | 965894 - 968944 | 110993.0 |
| sarcosine oxidase subunit gamma | SAMN04488118_102457 | Not Available | Positive | 968937 - 969503 | 20007.8 |
| hypothetical protein | SAMN04488118_102458 | Not Available | Positive | 969602 - 970000 | 14588.5 |
| superoxide dismutase, fe-mn family | SAMN04488118_102459 | Not Available | Positive | 970210 - 970809 | 22107.8 |
| lysm domain-containing protein | SAMN04488118_102460 | Not Available | Positive | 971169 - 972920 | 60308.2 |
| atp-binding cassette, subfamily b | SAMN04488118_102461 | Not Available | Positive | 973011 - 974819 | 66554.1 |
| type iv secretory pathway, virj component | SAMN04488118_102462 | Not Available | Negative | 974857 - 976203 | 47511.8 |
| multidrug efflux pump | SAMN04488118_102463 | Not Available | Negative | 976336 - 980109 | 136259.0 |
| membrane fusion protein, multidrug efflux system | SAMN04488118_102464 | Not Available | Negative | 980111 - 981406 | 45426.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
