Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Epibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Epibacterium |
| Species | Epibacterium ulvae |
| Strain | strain U95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935133 bp
Thymine Count
950131 bp
Guanine Count
1071311 bp
Cytosine Count
1037494 bp
Genome Length
3994069 bp
Protein-coding Genes
3836 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyldiaminopimelate desuccinylase | SAMN04488118_11068 | Not Available | Positive | 3064753 - 3065898 | 40829.6 |
| elaa protein | SAMN04488118_11069 | Not Available | Positive | 3065895 - 3066320 | 15598.8 |
| rnase r | SAMN04488118_11070 | Not Available | Positive | 3066412 - 3068688 | 83545.7 |
| lytic murein transglycosylase | SAMN04488118_11071 | Not Available | Positive | 3068801 - 3070063 | 46321.0 |
| putrescine aminotransferase | SAMN04488118_11072 | Not Available | Negative | 3070075 - 3071460 | 50027.9 |
| transcriptional regulator, gntr family | SAMN04488118_11073 | Not Available | Negative | 3071524 - 3072213 | 25558.0 |
| putrescine transport system substrate-binding protein | SAMN04488118_11074 | Not Available | Positive | 3072351 - 3073436 | 39327.2 |
| putrescine transport system atp-binding protein | SAMN04488118_11075 | Not Available | Positive | 3073511 - 3074638 | 41588.0 |
| putrescine transport system permease protein | SAMN04488118_11076 | Not Available | Positive | 3074638 - 3075519 | 33353.5 |
| putrescine transport system permease protein | SAMN04488118_11077 | Not Available | Positive | 3075516 - 3076325 | 29219.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
