Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Epibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Epibacterium |
| Species | Epibacterium ulvae |
| Strain | strain U95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935133 bp
Thymine Count
950131 bp
Guanine Count
1071311 bp
Cytosine Count
1037494 bp
Genome Length
3994069 bp
Protein-coding Genes
3836 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar or nucleoside kinase, ribokinase family | SAMN04488118_10975 | Not Available | Negative | 2924138 - 2925127 | 34912.4 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN04488118_10976 | Not Available | Negative | 2925124 - 2925768 | 24195.2 |
| dna-o6-methylguanine--protein-cysteine s-methyltransferase /transcriptional regulator ada | SAMN04488118_10977 | Not Available | Positive | 2925944 - 2926789 | 31316.6 |
| outer membrane protein ompa | SAMN04488118_10978 | Not Available | Positive | 2926921 - 2927574 | 22025.2 |
| nad(p)h-dependent fmn reductase | SAMN04488118_10979 | Not Available | Positive | 2927723 - 2928265 | 19494.5 |
| glycine/d-amino acid oxidase | SAMN04488118_10980 | Not Available | Negative | 2928262 - 2929302 | 36857.0 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | SAMN04488118_10981 | Not Available | Positive | 2929363 - 2930037 | 25172.4 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04488118_10982 | Not Available | Positive | 2930034 - 2930900 | 31368.5 |
| soluble lytic murein transglycosylase | SAMN04488118_10983 | Not Available | Negative | 2930874 - 2932844 | 72904.2 |
| dihydrodipicolinate synthase | SAMN04488118_10984 | Not Available | Positive | 2932971 - 2933843 | 30357.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
