Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Epibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Epibacterium |
| Species | Epibacterium ulvae |
| Strain | strain U95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935133 bp
Thymine Count
950131 bp
Guanine Count
1071311 bp
Cytosine Count
1037494 bp
Genome Length
3994069 bp
Protein-coding Genes
3836 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily c | SAMN04488118_10955 | Not Available | Positive | 2905985 - 2907742 | 62916.8 |
| hlyd family secretion protein | SAMN04488118_10956 | Not Available | Positive | 2907739 - 2909043 | 48563.2 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04488118_10957 | Not Available | Positive | 2909045 - 2909581 | 18455.3 |
| hypothetical protein | SAMN04488118_10958 | Not Available | Positive | 2909755 - 2910942 | 44657.4 |
| 4a-hydroxytetrahydrobiopterin dehydratase | SAMN04488118_10959 | Not Available | Positive | 2910939 - 2911235 | 11273.5 |
| thiol peroxidase (atypical 2-cys peroxiredoxin) | SAMN04488118_10960 | Not Available | Negative | 2911295 - 2911783 | 16864.1 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN04488118_10961 | Not Available | Positive | 2911878 - 2913089 | 43166.6 |
| 16s rrna (guanine966-n2)-methyltransferase | SAMN04488118_10962 | Not Available | Positive | 2913086 - 2913652 | 20503.7 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN04488118_10963 | Not Available | Positive | 2913662 - 2914327 | 23769.6 |
| methionine aminopeptidase, type i | SAMN04488118_10964 | Not Available | Negative | 2914363 - 2915172 | 29284.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
