Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Epibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Epibacterium |
| Species | Epibacterium ulvae |
| Strain | strain U95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935133 bp
Thymine Count
950131 bp
Guanine Count
1071311 bp
Cytosine Count
1037494 bp
Genome Length
3994069 bp
Protein-coding Genes
3836 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haem-no-binding | SAMN04488118_108170 | Not Available | Positive | 2822444 - 2823031 | 21491.7 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04488118_108171 | Not Available | Positive | 2823028 - 2824062 | 37877.3 |
| hypothetical protein | SAMN04488118_108172 | Not Available | Positive | 2824484 - 2824648 | 6093.25 |
| putative acetyltransferase | SAMN04488118_108173 | Not Available | Positive | 2825285 - 2825770 | 17186.4 |
| catalase-peroxidase | SAMN04488118_108174 | Not Available | Negative | 2825875 - 2828085 | 80304.9 |
| lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator | SAMN04488118_108175 | Not Available | Positive | 2828226 - 2829131 | 33416.5 |
| thiamine transport system substrate-binding protein | SAMN04488118_108177 | Not Available | Positive | 2829291 - 2830310 | 37113.6 |
| thiamine transport system permease protein | SAMN04488118_108178 | Not Available | Positive | 2830286 - 2831794 | 52578.3 |
| thiamine transport system atp-binding protein | SAMN04488118_108179 | Not Available | Positive | 2831781 - 2832470 | 24589.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488118_108180 | Not Available | Positive | 2832577 - 2833215 | 24174.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
