Epibacterium ulvae strain U95

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Epibacterium

Description

Epibacterium ulvae strain U95 is a Gram-negative, aerobic bacterium characterized by its rod shape. It thrives optimally at a temperature of 25°C and falls within the mesophilic temperature range, suggesting it is well-suited for moderate environmental conditions. The strain possesses a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation in its ecological niche. The accession number for Epibacterium ulvae strain U95 is FMWG00000000.1, which allows for easy reference and retrieval of its genomic data. This strain's aerobic nature implies that it requires oxygen for growth and metabolism, which may influence its distribution in environments where oxygen is readily available. From a biological and ecological perspective, the traits of Epibacterium ulvae strain U95 suggest that it may play a role in the decomposition of organic matter in its natural habitat. Its mesophilic characteristics could enable it to thrive in environments such as coastal regions or estuarine ecosystems, where organic materials are abundant and oxygen levels are sufficient. Understanding the specific ecological functions and interactions of this strain can provide insights into its role in biogeochemical cycles and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusEpibacterium
SpeciesEpibacterium ulvae
Strainstrain U95

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Epibacterium ulvae strain U95 genome assembly, contig:

Gene Summary

Adenine Count

935133 bp

Thymine Count

950131 bp

Guanine Count

1071311 bp

Cytosine Count

1037494 bp

Genome Length

3994069 bp

Protein-coding Genes

3836 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN04488118_106225Not AvailableNegative2382890 - 23830756593.67
16s rrna (cytosine967-c5)-methyltransferaseSAMN04488118_106226Not AvailablePositive2383171 - 238443344866.1
uncharacterized conserved protein, heparinase superfamilySAMN04488118_106227Not AvailablePositive2384551 - 238629063470.2
imp cyclohydrolase /phosphoribosylaminoimidazolecarboxamide formyltransferaseSAMN04488118_106228Not AvailablePositive2386310 - 238789956024.5
signal peptidase ii aspartic peptidase. merops family a08SAMN04488118_106229Not AvailablePositive2387966 - 238843917060.2
beta-barrel assembly machine subunit bamfSAMN04488118_106230Not AvailablePositive2388493 - 238899918072.5
zinc proteaseSAMN04488118_106231Not AvailablePositive2389164 - 239053150696.5
zinc proteaseSAMN04488118_106232Not AvailablePositive2390528 - 239184747903.7
aldehyde dehydrogenase (nad+)SAMN04488118_106233Not AvailableNegative2391917 - 239425383039.1
hypothetical proteinSAMN04488118_106234Not AvailableNegative2394259 - 239453710528.0

Displaying genes 2361 – 2370 of 3901 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.