Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Epibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Epibacterium |
| Species | Epibacterium ulvae |
| Strain | strain U95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935133 bp
Thymine Count
950131 bp
Guanine Count
1071311 bp
Cytosine Count
1037494 bp
Genome Length
3994069 bp
Protein-coding Genes
3836 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps-assembly lipoprotein | SAMN04488118_106175 | Not Available | Negative | 2331265 - 2331786 | 18497.1 |
| leucyl-trna synthetase | SAMN04488118_106176 | Not Available | Negative | 2331773 - 2334325 | 94822.3 |
| protein of unknown function | SAMN04488118_106177 | Not Available | Negative | 2334412 - 2334957 | 19733.4 |
| outer membrane protein ompu | SAMN04488118_106178 | Not Available | Positive | 2335235 - 2336137 | 31189.3 |
| hypothetical protein | SAMN04488118_106179 | Not Available | Positive | 2336247 - 2336906 | 23535.4 |
| l,d-transpeptidase catalytic domain | SAMN04488118_106180 | Not Available | Negative | 2336907 - 2337404 | 18489.2 |
| gtp cyclohydrolase ii | SAMN04488118_106181 | Not Available | Negative | 2337401 - 2338489 | 39276.7 |
| two component transcriptional regulator, winged helix family | SAMN04488118_106182 | Not Available | Positive | 2338660 - 2339346 | 25812.0 |
| gamma-butyrobetaine dioxygenase | SAMN04488118_106183 | Not Available | Negative | 2339490 - 2340602 | 41704.9 |
| exodeoxyribonuclease-3 | SAMN04488118_106184 | Not Available | Positive | 2340913 - 2341701 | 29506.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
