Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Epibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Epibacterium |
| Species | Epibacterium ulvae |
| Strain | strain U95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935133 bp
Thymine Count
950131 bp
Guanine Count
1071311 bp
Cytosine Count
1037494 bp
Genome Length
3994069 bp
Protein-coding Genes
3836 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | SAMN04488118_10653 | Not Available | Negative | 2216889 - 2217728 | 30264.7 |
| Trna-lys | Not Available | Not Available | Positive | 2217935 - 2218010 | Not Available |
| hypothetical protein | SAMN04488118_10655 | Not Available | Negative | 2218249 - 2218674 | 15764.6 |
| transcriptional regulator, arac family | SAMN04488118_10656 | Not Available | Negative | 2218809 - 2219897 | 40294.8 |
| dimethylglycine dehydrogenase | SAMN04488118_10657 | Not Available | Negative | 2219927 - 2222329 | 87810.9 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN04488118_10658 | Not Available | Positive | 2222551 - 2223534 | 35949.1 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN04488118_10659 | Not Available | Positive | 2223599 - 2224102 | 19026.9 |
| trap transporter, dctm subunit | SAMN04488118_10660 | Not Available | Positive | 2224104 - 2225429 | 47079.4 |
| sarcosine oxidase subunit beta | SAMN04488118_10661 | Not Available | Positive | 2225429 - 2226736 | 46756.7 |
| sarcosine oxidase subunit delta | SAMN04488118_10662 | Not Available | Positive | 2226751 - 2227017 | 10297.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
