Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Epibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Epibacterium |
| Species | Epibacterium ulvae |
| Strain | strain U95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935133 bp
Thymine Count
950131 bp
Guanine Count
1071311 bp
Cytosine Count
1037494 bp
Genome Length
3994069 bp
Protein-coding Genes
3836 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system secreted protein vgrg | SAMN04488118_104230 | Not Available | Positive | 1681684 - 1683672 | 71421.5 |
| hypothetical protein | SAMN04488118_104231 | Not Available | Positive | 1683682 - 1684263 | 20861.9 |
| zn-binding pro-ala-ala-arg (paar) domain-containing protein, incolved in typevi secretion | SAMN04488118_104232 | Not Available | Positive | 1684263 - 1684559 | 9381.77 |
| hypothetical protein | SAMN04488118_104233 | Not Available | Positive | 1684757 - 1685566 | 28779.1 |
| predicted arabinose efflux permease, mfs family | SAMN04488118_104234 | Not Available | Positive | 1685563 - 1687638 | 73664.2 |
| putative abc transport system substrate-binding protein | SAMN04488118_104235 | Not Available | Positive | 1687625 - 1688641 | 36825.4 |
| type vi secretion system protein impa | SAMN04488118_104236 | Not Available | Positive | 1688865 - 1690265 | 49473.2 |
| type vi secretion system secreted protein hcp | SAMN04488118_104237 | Not Available | Positive | 1690305 - 1690826 | 18440.1 |
| type vi secretion system protein impb | SAMN04488118_104238 | Not Available | Positive | 1690848 - 1691357 | 19001.4 |
| type vi secretion system protein impc | SAMN04488118_104239 | Not Available | Positive | 1691357 - 1692829 | 53840.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
