Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Epibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Epibacterium |
| Species | Epibacterium ulvae |
| Strain | strain U95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935133 bp
Thymine Count
950131 bp
Guanine Count
1071311 bp
Cytosine Count
1037494 bp
Genome Length
3994069 bp
Protein-coding Genes
3836 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coenzyme f420 hydrogenase subunit beta | SAMN04488118_10470 | Not Available | Positive | 1527505 - 1528740 | 44724.8 |
| 4-carboxymuconolactone decarboxylase | SAMN04488118_10471 | Not Available | Positive | 1528730 - 1529113 | 14288.2 |
| ferredoxin, 2fe-2s | SAMN04488118_10472 | Not Available | Positive | 1529121 - 1529438 | 11875.1 |
| transcriptional regulator, rpir family | SAMN04488118_10473 | Not Available | Positive | 1529650 - 1530552 | 33144.3 |
| glycine betaine/proline transport system substrate-binding protein | SAMN04488118_10474 | Not Available | Positive | 1530638 - 1531606 | 34985.0 |
| glycine betaine/proline transport system permease protein | SAMN04488118_10475 | Not Available | Positive | 1531674 - 1532711 | 37053.8 |
| glycine betaine/proline transport system atp-binding protein | SAMN04488118_10476 | Not Available | Positive | 1532714 - 1533769 | 38632.6 |
| lysr substrate binding domain-containing protein | SAMN04488118_10477 | Not Available | Negative | 1533906 - 1534859 | 36234.5 |
| hypothetical protein | SAMN04488118_10478 | Not Available | Positive | 1534904 - 1535740 | 31692.5 |
| hypothetical protein | SAMN04488118_10479 | Not Available | Positive | 1535743 - 1536495 | 28859.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
