Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Epibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Epibacterium |
| Species | Epibacterium ulvae |
| Strain | strain U95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935133 bp
Thymine Count
950131 bp
Guanine Count
1071311 bp
Cytosine Count
1037494 bp
Genome Length
3994069 bp
Protein-coding Genes
3836 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathionylspermidine synthase | SAMN04488118_10311 | Not Available | Positive | 1039853 - 1041016 | 43784.6 |
| hypothetical protein | SAMN04488118_10312 | Not Available | Positive | 1041250 - 1041546 | 11088.8 |
| hypothetical protein | SAMN04488118_10313 | Not Available | Positive | 1041546 - 1041854 | 10926.9 |
| ion channel | SAMN04488118_10314 | Not Available | Negative | 1041828 - 1042268 | 15703.6 |
| rnd family efflux transporter, mfp subunit | SAMN04488118_10315 | Not Available | Positive | 1042341 - 1043588 | 43647.9 |
| multidrug efflux pump subunit acrb | SAMN04488118_10316 | Not Available | Positive | 1043593 - 1046646 | 109424.0 |
| 2-dehydro-3-deoxygluconokinase | SAMN04488118_10317 | Not Available | Negative | 1047164 - 1048405 | 46140.5 |
| l-fuconolactonase | SAMN04488118_10318 | Not Available | Negative | 1048402 - 1049274 | 32334.7 |
| tagaturonate reductase | SAMN04488118_10319 | Not Available | Positive | 1049347 - 1050462 | 41632.6 |
| d-threo-aldose 1-dehydrogenase | SAMN04488118_10320 | Not Available | Positive | 1050459 - 1051436 | 34932.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
