Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| initiation factor 2 subunit family protein | SAMN03080610_00969 | Not Available | Negative | 1022859 - 1023278 | 14739.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN03080610_00970 | Not Available | Positive | 1023458 - 1024210 | 25578.6 |
| methylthioribose-1-phosphate isomerase | SAMN03080610_00971 | Not Available | Negative | 1024247 - 1025353 | 39609.1 |
| l-fuculose-phosphate aldolase | SAMN03080610_00972 | Not Available | Positive | 1025495 - 1026166 | 24209.2 |
| oligopeptide transport system atp-binding protein | SAMN03080610_00973 | Not Available | Negative | 1026245 - 1027903 | 61160.3 |
| oligopeptide transport system permease protein | SAMN03080610_00974 | Not Available | Negative | 1027905 - 1029038 | 41502.0 |
| oligopeptide transport system permease protein | SAMN03080610_00975 | Not Available | Negative | 1029047 - 1029970 | 33236.7 |
| oligopeptide transport system substrate-binding protein | SAMN03080610_00976 | Not Available | Negative | 1030099 - 1031685 | 59341.2 |
| fumarylpyruvate hydrolase | SAMN03080610_00977 | Not Available | Positive | 1031848 - 1032564 | 25382.0 |
| udp-glucuronate 4-epimerase | SAMN03080610_00978 | Not Available | Negative | 1032574 - 1033584 | 37182.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
