Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein impb | SAMN03080610_00959 | Not Available | Negative | 1012661 - 1013188 | 19853.6 |
| type vi secretion system protein impa | SAMN03080610_00960 | Not Available | Negative | 1013242 - 1014366 | 40158.1 |
| type vi secretion system protein vasg | SAMN03080610_00961 | Not Available | Positive | 1014718 - 1017417 | 97374.1 |
| type vi secretion system secreted protein hcp | SAMN03080610_00962 | Not Available | Positive | 1017461 - 1017937 | 17383.3 |
| hypothetical protein | SAMN03080610_00963 | Not Available | Positive | 1018050 - 1018640 | 22096.7 |
| rhs element vgr protein | SAMN03080610_00964 | Not Available | Positive | 1018704 - 1019668 | 36074.4 |
| hypothetical protein | SAMN03080610_00965 | Not Available | Negative | 1019669 - 1019929 | 9606.57 |
| glutathione s-transferase | SAMN03080610_00966 | Not Available | Positive | 1020071 - 1020763 | 25800.9 |
| 5'-methylthioribose kinase | SAMN03080610_00967 | Not Available | Positive | 1020856 - 1022151 | 47641.4 |
| acetyltransferase (gnat) domain-containing protein | SAMN03080610_00968 | Not Available | Negative | 1022177 - 1022710 | 19730.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
