Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dolichol-phosphate mannosyltransferase | SAMN03080610_00939 | Not Available | Positive | 986431 - 987225 | 29484.2 |
| glycine/d-amino acid oxidase | SAMN03080610_00940 | Not Available | Positive | 987233 - 988342 | 40950.1 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN03080610_00941 | Not Available | Positive | 988356 - 988835 | 17102.9 |
| nad dependent epimerase/dehydratase family protein | SAMN03080610_00942 | Not Available | Positive | 988820 - 989626 | 29979.7 |
| sugar phosphate isomerase/epimerase | SAMN03080610_00943 | Not Available | Positive | 989629 - 990486 | 30351.8 |
| uncharacterized membrane protein | SAMN03080610_00944 | Not Available | Positive | 990467 - 991882 | 50192.0 |
| hypothetical protein | SAMN03080610_00945 | Not Available | Positive | 992665 - 993486 | 30191.8 |
| uncharacterized protein ywqg | SAMN03080610_00946 | Not Available | Negative | 993537 - 994562 | 38558.2 |
| polysaccharide export outer membrane protein | SAMN03080610_00947 | Not Available | Positive | 994905 - 996068 | 40199.9 |
| type vi secretion system protein impm | SAMN03080610_00948 | Not Available | Negative | 996079 - 997560 | 53111.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
