Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein, paat family | SAMN03080610_00929 | Not Available | Negative | 977876 - 978655 | 28713.6 |
| octopine/nopaline transport system permease protein | SAMN03080610_00930 | Not Available | Negative | 978648 - 979388 | 27122.9 |
| octopine/nopaline transport system permease protein | SAMN03080610_00931 | Not Available | Negative | 979393 - 980115 | 25341.3 |
| octopine/nopaline transport system substrate-binding protein | SAMN03080610_00932 | Not Available | Negative | 980319 - 981332 | 35744.4 |
| gntr family transcriptional regulator, histidine utilization repressor | SAMN03080610_00933 | Not Available | Positive | 981444 - 982187 | 27103.6 |
| glycine/d-amino acid oxidase | SAMN03080610_00934 | Not Available | Positive | 982274 - 983602 | 47933.2 |
| hypothetical protein | SAMN03080610_00935 | Not Available | Negative | 983670 - 983861 | 6727.31 |
| rubrerythrin | SAMN03080610_00936 | Not Available | Negative | 983886 - 984329 | 16105.8 |
| hypothetical protein | SAMN03080610_00937 | Not Available | Negative | 984550 - 984783 | 8004.69 |
| hypothetical protein | SAMN03080610_00938 | Not Available | Positive | 985330 - 986325 | 36950.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
