Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulator of rnase e activity rraa | SAMN03080610_00909 | Not Available | Positive | 956782 - 957456 | 24195.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN03080610_00910 | Not Available | Positive | 957483 - 958439 | 33797.9 |
| tripartite tricarboxylate transporter tctb family protein | SAMN03080610_00911 | Not Available | Positive | 958462 - 958923 | 16522.7 |
| putative tricarboxylic transport membrane protein | SAMN03080610_00912 | Not Available | Positive | 958951 - 960447 | 51892.3 |
| aspartate aminotransferase | SAMN03080610_00913 | Not Available | Positive | 960493 - 961695 | 42624.9 |
| hypothetical protein | SAMN03080610_00914 | Not Available | Positive | 962102 - 962695 | 21919.7 |
| l-threonine aldolase | SAMN03080610_00915 | Not Available | Negative | 962766 - 963824 | 37308.7 |
| selenocysteine lyase/cysteine desulfurase | SAMN03080610_00916 | Not Available | Negative | 963821 - 965038 | 44011.0 |
| general l-amino acid transport system atp-binding protein | SAMN03080610_00917 | Not Available | Negative | 965046 - 965798 | 27220.8 |
| general l-amino acid transport system permease protein | SAMN03080610_00918 | Not Available | Negative | 965801 - 966925 | 40812.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
