Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribose-phosphate aldolase | SAMN03080610_00899 | Not Available | Positive | 944458 - 945498 | 37509.6 |
| aldehyde dehydrogenase (nad+) | SAMN03080610_00900 | Not Available | Positive | 945509 - 947758 | 77363.7 |
| hypothetical protein | SAMN03080610_00901 | Not Available | Negative | 947859 - 948935 | 39997.0 |
| gh3 auxin-responsive promoter | SAMN03080610_00902 | Not Available | Negative | 949087 - 950631 | 57247.1 |
| prc-barrel domain-containing protein | SAMN03080610_00903 | Not Available | Negative | 950828 - 951208 | 13438.9 |
| aspartate/methionine/tyrosine aminotransferase | SAMN03080610_00904 | Not Available | Positive | 951489 - 952661 | 42756.4 |
| dihydropteroate synthase | SAMN03080610_00905 | Not Available | Negative | 952663 - 953562 | 31056.2 |
| protein of unknown function | SAMN03080610_00906 | Not Available | Negative | 953674 - 954750 | 37613.1 |
| hypothetical protein | SAMN03080610_00907 | Not Available | Positive | 954870 - 955730 | 31732.4 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_00908 | Not Available | Negative | 955743 - 956639 | 32660.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
