Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase | SAMN03080610_00879 | Not Available | Positive | 925450 - 926484 | 38109.1 |
| d-amino-acid dehydrogenase | SAMN03080610_00880 | Not Available | Negative | 926492 - 927814 | 47475.3 |
| putative polyhydroxyalkanoic acid system protein (pha_gran_rgn) | SAMN03080610_00881 | Not Available | Positive | 927883 - 928197 | 12016.6 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_00882 | Not Available | Negative | 928250 - 929143 | 32833.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN03080610_00883 | Not Available | Positive | 929251 - 929991 | 25676.8 |
| 4-oxalocrotonate tautomerase | SAMN03080610_00884 | Not Available | Positive | 930058 - 930273 | 8056.45 |
| d-lactate dehydrogenase | SAMN03080610_00885 | Not Available | Positive | 930410 - 931414 | 36138.1 |
| hypothetical protein | SAMN03080610_00886 | Not Available | Positive | 931640 - 932245 | 22679.2 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN03080610_00887 | Not Available | Positive | 932361 - 933032 | 23485.3 |
| fucose permease | SAMN03080610_00888 | Not Available | Negative | 933053 - 934198 | 38502.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
