Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080610_00869 | Not Available | Negative | 911629 - 912240 | 22279.8 |
| ig-like domain (group 3) | SAMN03080610_00870 | Not Available | Positive | 912403 - 913863 | 49726.4 |
| atp-binding cassette, subfamily b | SAMN03080610_00871 | Not Available | Positive | 914023 - 915936 | 70804.3 |
| phosphatidylserine decarboxylase | SAMN03080610_00872 | Not Available | Positive | 916030 - 916755 | 25657.4 |
| cdp-diacylglycerol---serine o-phosphatidyltransferase | SAMN03080610_00873 | Not Available | Positive | 916752 - 917624 | 31248.9 |
| multidrug efflux pump | SAMN03080610_00874 | Not Available | Negative | 917760 - 921257 | 125528.0 |
| membrane fusion protein, multidrug efflux system | SAMN03080610_00875 | Not Available | Negative | 921254 - 922393 | 39945.7 |
| dna-binding transcriptional regulator, padr family | SAMN03080610_00876 | Not Available | Negative | 922398 - 922982 | 21574.6 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN03080610_00877 | Not Available | Positive | 923530 - 924558 | 37268.7 |
| response regulator receiver domain-containing protein | SAMN03080610_00878 | Not Available | Positive | 924833 - 925231 | 14289.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
