Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-5-phosphate isomerase | SAMN03080610_00839 | Not Available | Positive | 885881 - 886573 | 24028.0 |
| hypothetical protein | SAMN03080610_00840 | Not Available | Positive | 886647 - 887210 | 20370.4 |
| nadph-glutathione reductase | SAMN03080610_00841 | Not Available | Positive | 887307 - 888710 | 51296.5 |
| protein tyrosine/serine phosphatase | SAMN03080610_00842 | Not Available | Positive | 888804 - 889469 | 23770.4 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN03080610_00843 | Not Available | Negative | 889535 - 890164 | 21932.9 |
| sugar phosphate permease | SAMN03080610_00844 | Not Available | Negative | 890316 - 891530 | 41983.9 |
| hypothetical protein | SAMN03080610_00845 | Not Available | Positive | 891699 - 892283 | 20960.8 |
| protein of unknown function | SAMN03080610_00846 | Not Available | Positive | 892388 - 892735 | 13284.7 |
| carboxylate-amine ligase | SAMN03080610_00847 | Not Available | Negative | 892926 - 894122 | 44421.3 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN03080610_00848 | Not Available | Positive | 894315 - 895697 | 51152.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
