Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycolate phosphatase | SAMN03080610_00829 | Not Available | Negative | 876356 - 877048 | 24322.6 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN03080610_00830 | Not Available | Positive | 877270 - 877893 | 22922.7 |
| hypothetical protein | SAMN03080610_00831 | Not Available | Positive | 877985 - 878272 | 10549.3 |
| threonine/homoserine efflux transporter rhta | SAMN03080610_00832 | Not Available | Negative | 878485 - 879390 | 32228.1 |
| arac family transcriptional regulator | SAMN03080610_00833 | Not Available | Positive | 879560 - 880429 | 32000.3 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_00834 | Not Available | Negative | 880433 - 881359 | 33615.6 |
| nadph:quinone reductase | SAMN03080610_00835 | Not Available | Positive | 881502 - 882521 | 36002.4 |
| hypothetical protein | SAMN03080610_00836 | Not Available | Positive | 882682 - 883674 | 35427.6 |
| porphobilinogen synthase | SAMN03080610_00837 | Not Available | Negative | 883787 - 884773 | 35571.6 |
| transcriptional regulator, arac family | SAMN03080610_00838 | Not Available | Negative | 884842 - 885681 | 30450.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
