Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | SAMN03080610_00809 | Not Available | Positive | 857506 - 858231 | 27024.5 |
| lrp/asnc family transcriptional regulator | SAMN03080610_00810 | Not Available | Positive | 858295 - 858783 | 18528.6 |
| radical sam superfamily enzyme ygiq, upf0313 family | SAMN03080610_00811 | Not Available | Negative | 858746 - 860779 | 76767.4 |
| hypothetical protein | SAMN03080610_00812 | Not Available | Negative | 860861 - 861229 | 13292.8 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN03080610_00813 | Not Available | Negative | 861530 - 862402 | 31406.9 |
| adenine deaminase | SAMN03080610_00814 | Not Available | Positive | 862583 - 864379 | 63513.5 |
| polar amino acid transport system permease protein | SAMN03080610_00815 | Not Available | Negative | 864391 - 865308 | 33405.0 |
| polar amino acid transport system permease protein | SAMN03080610_00816 | Not Available | Negative | 865305 - 866012 | 25577.7 |
| polar amino acid transport system substrate-binding protein | SAMN03080610_00817 | Not Available | Negative | 866084 - 866857 | 27935.8 |
| molybdopterin guanine dinucleotide biosynthesis accessory protein mobb | SAMN03080610_00818 | Not Available | Negative | 867054 - 867569 | 18782.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
