Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system substrate-binding protein | SAMN03080610_00799 | Not Available | Negative | 845629 - 847287 | 62089.4 |
| peptide/nickel transport system atp-binding protein | SAMN03080610_00800 | Not Available | Negative | 847332 - 848975 | 59462.6 |
| transcriptional regulator, contains xre-family hth domain | SAMN03080610_00801 | Not Available | Positive | 849268 - 849873 | 21665.8 |
| glycine/d-amino acid oxidase | SAMN03080610_00802 | Not Available | Positive | 849897 - 851201 | 47557.1 |
| pp_00794 | SAMN03080610_00803 | Not Available | Positive | 851475 - 852473 | Not Available |
| aspartyl protease family protein | SAMN03080610_00804 | Not Available | Negative | 852516 - 853166 | 23258.2 |
| cobalamin-5'-phosphate synthase | SAMN03080610_00805 | Not Available | Negative | 853186 - 853971 | 27049.6 |
| nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | SAMN03080610_00806 | Not Available | Positive | 854131 - 855183 | 36288.7 |
| two-component system, cell cycle sensor histidine kinase plec | SAMN03080610_00807 | Not Available | Negative | 855252 - 856811 | 56153.7 |
| glutathione s-transferase | SAMN03080610_00808 | Not Available | Positive | 856935 - 857543 | 23101.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
