Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme-degrading monooxygenase hmoa | SAMN03080610_00789 | Not Available | Positive | 833712 - 834023 | 12256.2 |
| aspartate racemase | SAMN03080610_00790 | Not Available | Positive | 834097 - 834834 | 27194.7 |
| isochorismate synthase | SAMN03080610_00791 | Not Available | Positive | 834959 - 836284 | 46581.1 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | SAMN03080610_00792 | Not Available | Positive | 836281 - 837975 | 58634.3 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | SAMN03080610_00793 | Not Available | Positive | 837972 - 838808 | 30192.3 |
| o-succinylbenzoate synthase | SAMN03080610_00794 | Not Available | Positive | 838854 - 839945 | 38078.0 |
| o-succinylbenzoic acid--coa ligase | SAMN03080610_00795 | Not Available | Negative | 839874 - 841250 | 47654.7 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN03080610_00796 | Not Available | Positive | 841448 - 843601 | 73668.6 |
| peptide/nickel transport system permease protein | SAMN03080610_00797 | Not Available | Negative | 843703 - 844590 | 31946.7 |
| peptide/nickel transport system permease protein | SAMN03080610_00798 | Not Available | Negative | 844607 - 845557 | 35079.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
