Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose-1,6-bisphosphatase i | SAMN03080610_00779 | Not Available | Positive | 823516 - 824568 | 38173.4 |
| phosphoribulokinase | SAMN03080610_00780 | Not Available | Positive | 824578 - 825453 | 33221.4 |
| transketolase | SAMN03080610_00781 | Not Available | Positive | 825469 - 827511 | 73231.1 |
| fructose-bisphosphate aldolase | SAMN03080610_00782 | Not Available | Positive | 827511 - 828593 | 39259.9 |
| ribulose-bisphosphate carboxylase large chain | SAMN03080610_00783 | Not Available | Positive | 828629 - 830086 | 53559.1 |
| ribulose-bisphosphate carboxylase small chain | SAMN03080610_00784 | Not Available | Positive | 830120 - 830536 | 16049.7 |
| probable rubsico expression protein cbbx | SAMN03080610_00785 | Not Available | Positive | 830610 - 831569 | 36189.1 |
| ribulose-5-phosphate 3-epimerase | SAMN03080610_00786 | Not Available | Positive | 831605 - 832288 | 24016.9 |
| ahpc/tsa family protein | SAMN03080610_00787 | Not Available | Positive | 832310 - 832861 | 20364.9 |
| phosphoglycolate phosphatase | SAMN03080610_00788 | Not Available | Positive | 832861 - 833544 | 23868.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
