Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| looped-hinge helix dna binding domain-containing protein, abrb family | SAMN03080610_00769 | Not Available | Positive | 816638 - 816973 | 12849.1 |
| predicted nucleic-acid-binding protein, contains pin domain | SAMN03080610_00770 | Not Available | Positive | 816970 - 817365 | 14421.4 |
| urease subunit alpha | SAMN03080610_00771 | Not Available | Positive | 817373 - 819085 | 60427.3 |
| n-acetylglutamate synthase, gnat family | SAMN03080610_00772 | Not Available | Positive | 819108 - 819632 | 19157.1 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN03080610_00773 | Not Available | Positive | 819696 - 820304 | 21304.8 |
| urease accessory protein | SAMN03080610_00774 | Not Available | Positive | 820301 - 820825 | 19537.1 |
| yrhk-like protein | SAMN03080610_00775 | Not Available | Positive | 820848 - 821129 | 10665.9 |
| urease accessory protein | SAMN03080610_00776 | Not Available | Positive | 821104 - 821796 | 24042.4 |
| urease accessory protein | SAMN03080610_00777 | Not Available | Positive | 821793 - 822443 | 23078.7 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_00778 | Not Available | Negative | 822451 - 823401 | 34005.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
