Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter, dctm subunit | SAMN03080610_00759 | Not Available | Positive | 804803 - 806125 | 46082.2 |
| acyl-coa dehydrogenase | SAMN03080610_00760 | Not Available | Positive | 806243 - 808531 | 83423.0 |
| acetyl-coa c-acetyltransferase | SAMN03080610_00761 | Not Available | Positive | 808531 - 809817 | 46613.8 |
| 3-hydroxyacyl-coa dehydrogenase / enoyl-coa hydratase / 3-hydroxybutyryl-coa epimerase | SAMN03080610_00762 | Not Available | Positive | 809829 - 811946 | 76932.5 |
| acyl-coa hydrolase | SAMN03080610_00763 | Not Available | Positive | 811933 - 813792 | 67738.4 |
| urease accessory protein | SAMN03080610_00764 | Not Available | Positive | 813852 - 814706 | 30221.7 |
| urease subunit gamma | SAMN03080610_00765 | Not Available | Positive | 814716 - 815018 | 11022.5 |
| urease subunit beta | SAMN03080610_00766 | Not Available | Positive | 815066 - 815371 | 11076.3 |
| hypothetical protein | SAMN03080610_00767 | Not Available | Negative | 815480 - 815938 | 15536.3 |
| uncharacterized conserved protein yect, duf1311 family | SAMN03080610_00768 | Not Available | Positive | 816132 - 816539 | 14429.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
