Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised 5xtm membrane bcr, yitt family cog1284 | SAMN03080610_00749 | Not Available | Negative | 793013 - 793627 | 21836.3 |
| peptide/nickel transport system substrate-binding protein | SAMN03080610_00750 | Not Available | Positive | 794025 - 795752 | 65087.9 |
| alcohol dehydrogenase, class iv | SAMN03080610_00751 | Not Available | Positive | 796076 - 797254 | 40029.2 |
| sarcosine oxidase, gamma subunit family, heterotetrameric form | SAMN03080610_00752 | Not Available | Negative | 797383 - 797988 | 21233.6 |
| sarcosine oxidase subunit alpha | SAMN03080610_00753 | Not Available | Negative | 797981 - 800980 | 106567.0 |
| sarcosine oxidase subunit delta | SAMN03080610_00754 | Not Available | Negative | 800980 - 801249 | 10218.1 |
| sarcosine oxidase subunit beta | SAMN03080610_00755 | Not Available | Negative | 801287 - 802546 | 45549.8 |
| tpr repeat-containing protein | SAMN03080610_00756 | Not Available | Negative | 802746 - 803459 | 26355.3 |
| uncharacterized conserved protein | SAMN03080610_00757 | Not Available | Positive | 803673 - 804089 | 15148.5 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN03080610_00758 | Not Available | Positive | 804177 - 804806 | 22257.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
