Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 3 | SAMN03080610_00739 | Not Available | Negative | 783864 - 784697 | 30733.2 |
| cytochrome c oxidase assembly protein subunit 11 | SAMN03080610_00740 | Not Available | Negative | 784741 - 785328 | 21172.2 |
| hypothetical protein | SAMN03080610_00741 | Not Available | Negative | 785328 - 785495 | 6072.56 |
| protoheme ix farnesyltransferase | SAMN03080610_00742 | Not Available | Negative | 785492 - 786436 | 33561.9 |
| cytochrome c oxidase subunit 1 | SAMN03080610_00743 | Not Available | Negative | 786575 - 788224 | 60636.8 |
| cytochrome c oxidase subunit 2 | SAMN03080610_00744 | Not Available | Negative | 788261 - 789253 | 37059.0 |
| invasion protein ialb, involved in pathogenesis | SAMN03080610_00745 | Not Available | Positive | 789491 - 789994 | 17812.8 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | SAMN03080610_00746 | Not Available | Negative | 790102 - 791106 | 35385.3 |
| protein of unknown function | SAMN03080610_00747 | Not Available | Positive | 791291 - 791770 | 16164.5 |
| ribonuclease t2 | SAMN03080610_00748 | Not Available | Positive | 791912 - 793012 | 39669.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
