Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| very-short-patch-repair endonuclease | SAMN03080610_00719 | Not Available | Negative | 767482 - 767982 | 18898.5 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | SAMN03080610_00720 | Not Available | Negative | 768043 - 769005 | 33709.8 |
| virulence factor | SAMN03080610_00721 | Not Available | Negative | 769132 - 769431 | 11033.1 |
| protein of unknown function | SAMN03080610_00722 | Not Available | Negative | 769554 - 770204 | 23256.6 |
| brna antitoxin of type ii toxin-antitoxin system | SAMN03080610_00723 | Not Available | Positive | 770436 - 770753 | 12217.3 |
| predicted small secreted protein | SAMN03080610_00724 | Not Available | Positive | 770849 - 770998 | 5204.2 |
| methylmalonyl-coa mutase c-terminal domain-containing protein | SAMN03080610_00725 | Not Available | Negative | 771163 - 771867 | 25470.9 |
| trimethylamine---corrinoid protein co-methyltransferase | SAMN03080610_00726 | Not Available | Positive | 772091 - 773662 | 56679.4 |
| hypothetical protein | SAMN03080610_00727 | Not Available | Positive | 773762 - 774466 | 27091.2 |
| glutathione s-transferase | SAMN03080610_00728 | Not Available | Negative | 775004 - 775630 | 23323.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
