Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein, multidrug efflux system | SAMN03080610_00709 | Not Available | Negative | 755614 - 756972 | 48793.1 |
| dna-binding transcriptional regulator, marr family | SAMN03080610_00710 | Not Available | Negative | 756978 - 757445 | 17592.2 |
| sarcosine oxidase subunit beta | SAMN03080610_00711 | Not Available | Positive | 757606 - 758856 | 44785.8 |
| sarcosine oxidase subunit delta | SAMN03080610_00712 | Not Available | Positive | 758867 - 759232 | 13373.8 |
| sarcosine oxidase subunit alpha | SAMN03080610_00713 | Not Available | Positive | 759232 - 762294 | 111316.0 |
| sarcosine oxidase subunit gamma | SAMN03080610_00714 | Not Available | Positive | 762287 - 762982 | 25282.1 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN03080610_00715 | Not Available | Positive | 763025 - 763642 | 22344.1 |
| hypothetical protein | SAMN03080610_00716 | Not Available | Negative | 763700 - 764539 | 30781.3 |
| ribbon-helix-helix protein, copg family | SAMN03080610_00717 | Not Available | Positive | 765044 - 765232 | 7010.49 |
| uncharacterized 2fe-2 and 4fe-4s clusters-containing protein, contains duf4445 domain | SAMN03080610_00718 | Not Available | Negative | 765369 - 767423 | 73441.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
