Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, hxlr family | SAMN03080610_00644 | Not Available | Negative | 688357 - 688767 | 15191.4 |
| nad(p)h dehydrogenase (quinone) | SAMN03080610_00645 | Not Available | Positive | 688883 - 689752 | 30188.3 |
| signal transduction histidine kinase | SAMN03080610_00671 | Not Available | Positive | 709792 - 711234 | 51481.5 |
| surface antigen | SAMN03080610_00672 | Not Available | Positive | 711362 - 711838 | 16270.2 |
| cytochrome c-type biogenesis protein ccmh | SAMN03080610_00673 | Not Available | Positive | 712007 - 713260 | 44401.7 |
| cytochrome c-type biogenesis protein ccme | SAMN03080610_00674 | Not Available | Positive | 713257 - 713709 | 16390.6 |
| cytochrome c-type biogenesis protein ccmf | SAMN03080610_00675 | Not Available | Positive | 713709 - 715712 | 72428.1 |
| cytochrome c-type biogenesis protein ccmh | SAMN03080610_00676 | Not Available | Positive | 715709 - 716209 | 18491.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03080610_00677 | Not Available | Positive | 716422 - 717399 | 36823.6 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN03080610_00678 | Not Available | Positive | 717396 - 719507 | 77316.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
