Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein | SAMN03080610_00634 | Not Available | Negative | 676681 - 677292 | 21973.7 |
| hypothetical protein | SAMN03080610_00635 | Not Available | Negative | 677289 - 677864 | 19990.8 |
| penicillin-binding protein 1a | SAMN03080610_00636 | Not Available | Negative | 677875 - 680022 | 78344.8 |
| hypothetical protein | SAMN03080610_00637 | Not Available | Positive | 680159 - 680620 | 17916.0 |
| luciferase family oxidoreductase, group 1 | SAMN03080610_00638 | Not Available | Positive | 680687 - 681778 | 39004.2 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN03080610_00639 | Not Available | Positive | 681890 - 684013 | 79484.4 |
| hypothetical protein | SAMN03080610_00640 | Not Available | Negative | 684187 - 684771 | 22197.3 |
| hypothetical protein | SAMN03080610_00641 | Not Available | Positive | 685351 - 685962 | 22024.8 |
| large terminase phage packaging protein | SAMN03080610_00642 | Not Available | Positive | 686027 - 687361 | 47974.4 |
| hypothetical protein | SAMN03080610_00643 | Not Available | Negative | 687181 - 687990 | 28533.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
