Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tpr repeat | SAMN03080610_00574 | Not Available | Positive | 626382 - 628544 | 75915.6 |
| predicted arabinose efflux permease, mfs family | SAMN03080610_00575 | Not Available | Negative | 628669 - 629916 | 42105.7 |
| probable addiction module antidote protein | SAMN03080610_00576 | Not Available | Negative | 630195 - 630539 | 12408.6 |
| putative addiction module killer protein | SAMN03080610_00577 | Not Available | Negative | 630536 - 630835 | 10981.5 |
| regulator of nucleoside diphosphate kinase | SAMN03080610_00578 | Not Available | Positive | 631226 - 631681 | 16223.6 |
| regulator of nucleoside diphosphate kinase | SAMN03080610_00579 | Not Available | Positive | 631814 - 632101 | 10485.7 |
| hypothetical protein | SAMN03080610_00580 | Not Available | Positive | 632101 - 632367 | 9525.34 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_00581 | Not Available | Negative | 632378 - 633331 | 34463.2 |
| hypothetical protein | SAMN03080610_00582 | Not Available | Positive | 633443 - 633787 | 12597.1 |
| nipsnap protein | SAMN03080610_00583 | Not Available | Positive | 633820 - 634434 | 22695.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
