Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080610_00564 | Not Available | Positive | 611448 - 611870 | 14235.0 |
| hypothetical protein | SAMN03080610_00565 | Not Available | Positive | 612174 - 614216 | 76368.6 |
| hypothetical protein | SAMN03080610_00566 | Not Available | Positive | 614335 - 615531 | 40768.6 |
| zn-dependent protease (includes spoivfb) | SAMN03080610_00567 | Not Available | Positive | 615704 - 616462 | 26345.5 |
| uncharacterized conserved protein, duf2252 family | SAMN03080610_00568 | Not Available | Negative | 616498 - 617931 | 53317.7 |
| polar amino acid transport system substrate-binding protein | SAMN03080610_00569 | Not Available | Positive | 618459 - 621581 | 114479.0 |
| hypothetical protein | SAMN03080610_00570 | Not Available | Positive | 622384 - 622872 | 18262.0 |
| tetratricopeptide repeat-containing protein | SAMN03080610_00571 | Not Available | Negative | 623500 - 623982 | 17785.6 |
| hypothetical protein | SAMN03080610_00572 | Not Available | Negative | 624122 - 625162 | 38750.0 |
| superoxide dismutase, fe-mn family | SAMN03080610_00573 | Not Available | Negative | 625558 - 626157 | 22705.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
