Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN03080610_00554 | Not Available | Positive | 598690 - 599625 | 33973.5 |
| iron complex transport system atp-binding protein | SAMN03080610_00555 | Not Available | Negative | 600246 - 601019 | 28102.9 |
| iron complex transport system permease protein | SAMN03080610_00556 | Not Available | Negative | 601016 - 601996 | 33259.5 |
| iron complex transport system substrate-binding protein | SAMN03080610_00557 | Not Available | Negative | 602137 - 603144 | 36372.4 |
| methyltransferase domain-containing protein | SAMN03080610_00558 | Not Available | Positive | 603570 - 606878 | 123751.0 |
| 2-haloacid dehalogenase | SAMN03080610_00559 | Not Available | Negative | 607076 - 607735 | 24650.1 |
| branched-chain amino acid aminotransferase | SAMN03080610_00560 | Not Available | Positive | 608032 - 608886 | 31287.4 |
| hypothetical protein | SAMN03080610_00561 | Not Available | Positive | 608988 - 609338 | 12509.1 |
| cytochrome c, mono-and diheme variants | SAMN03080610_00562 | Not Available | Negative | 609865 - 610830 | 33583.5 |
| cytochrome c556 | SAMN03080610_00563 | Not Available | Negative | 610838 - 611317 | 16502.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
