Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted nucleotide-binding protein containing tir-like domain-containing protein | SAMN03080610_00534 | Not Available | Negative | 579529 - 580905 | 51740.8 |
| glutaredoxin | SAMN03080610_00535 | Not Available | Positive | 581229 - 582080 | 31146.8 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN03080610_00536 | Not Available | Positive | 582253 - 583635 | 49868.9 |
| hypothetical protein | SAMN03080610_00537 | Not Available | Positive | 583648 - 584229 | 20575.0 |
| protein of unknown function | SAMN03080610_00538 | Not Available | Positive | 584237 - 584494 | 9707.45 |
| hypothetical protein | SAMN03080610_00539 | Not Available | Positive | 584491 - 585036 | 19113.8 |
| hypothetical protein | SAMN03080610_00540 | Not Available | Negative | 585260 - 585892 | 24383.1 |
| hypothetical protein | SAMN03080610_00541 | Not Available | Negative | 586445 - 586654 | 8109.91 |
| hypothetical protein | SAMN03080610_00542 | Not Available | Negative | 586673 - 586897 | 8083.46 |
| zn-dependent peptidase imma, m78 family | SAMN03080610_00543 | Not Available | Positive | 587000 - 588079 | 40043.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
