Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | SAMN03080610_00514 | Not Available | Positive | 557706 - 558881 | 43207.1 |
| putative abc transport system atp-binding protein | SAMN03080610_00515 | Not Available | Positive | 558859 - 561585 | 101022.0 |
| cyclic nucleotide-binding domain-containing protein | SAMN03080610_00516 | Not Available | Positive | 561602 - 562063 | 16871.5 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | SAMN03080610_00517 | Not Available | Positive | 562065 - 562919 | 31454.5 |
| adenylate cyclase | SAMN03080610_00518 | Not Available | Positive | 562928 - 564286 | 48668.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN03080610_00519 | Not Available | Positive | 564441 - 565184 | 25503.3 |
| asparaginase | SAMN03080610_00520 | Not Available | Positive | 565200 - 566207 | 34885.8 |
| hypothetical protein | SAMN03080610_00521 | Not Available | Negative | 566200 - 566436 | 8797.56 |
| methylmalonyl-coa mutase metallochaperone meab | SAMN03080610_00522 | Not Available | Negative | 566538 - 567560 | 35778.8 |
| uncharacterized conserved protein ybjq, upf0145 family | SAMN03080610_00523 | Not Available | Negative | 567583 - 567909 | 11507.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
