Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide lyase | SAMN03080610_00504 | Not Available | Positive | 544825 - 545781 | 36078.7 |
| lps sulfotransferase nodh | SAMN03080610_00505 | Not Available | Negative | 545812 - 546861 | 39233.9 |
| hypothetical protein | SAMN03080610_00506 | Not Available | Negative | 546881 - 547660 | 28650.1 |
| predicted glycosyl transferase | SAMN03080610_00507 | Not Available | Negative | 547660 - 548802 | 40345.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03080610_00508 | Not Available | Negative | 548802 - 549890 | 38655.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03080610_00509 | Not Available | Negative | 549887 - 551140 | 46149.3 |
| predicted glycosyl transferase | SAMN03080610_00510 | Not Available | Negative | 551164 - 552360 | 44840.1 |
| peptide/nickel transport system atp-binding protein | SAMN03080610_00511 | Not Available | Positive | 552746 - 554698 | 70833.5 |
| peptide/nickel transport system substrate-binding protein | SAMN03080610_00512 | Not Available | Positive | 554698 - 556656 | 74364.6 |
| peptide/nickel transport system permease protein | SAMN03080610_00513 | Not Available | Positive | 556684 - 557709 | 37333.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
