Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent 2,4-dienoyl-coa reductase, sulfur reductase | SAMN03080610_00494 | Not Available | Positive | 532554 - 533954 | 49806.5 |
| sarcosine oxidase subunit beta | SAMN03080610_00495 | Not Available | Positive | 533951 - 535150 | 42097.6 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN03080610_00496 | Not Available | Positive | 535799 - 536863 | 39659.6 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN03080610_00497 | Not Available | Positive | 536923 - 538029 | 40554.9 |
| binding-protein-dependent transport system inner membrane component | SAMN03080610_00498 | Not Available | Positive | 538094 - 539839 | 62797.9 |
| d-amino-acid dehydrogenase | SAMN03080610_00499 | Not Available | Positive | 539953 - 541263 | 47401.9 |
| ornithine cyclodeaminase | SAMN03080610_00500 | Not Available | Positive | 541260 - 542264 | 35217.1 |
| aldehyde dehydrogenase (nad+) | SAMN03080610_00501 | Not Available | Positive | 542427 - 543929 | 52593.8 |
| Trna-pro | Not Available | Not Available | Positive | 544339 - 544415 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 544608 - 544682 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
