Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucyl/phenylalanyl-trna--protein transferase | SAMN03080610_00454 | Not Available | Positive | 489532 - 490209 | 25125.8 |
| hypothetical protein | SAMN03080610_00455 | Not Available | Negative | 490206 - 490673 | 16997.1 |
| nadh:ubiquinone oxidoreductase subunit | SAMN03080610_00456 | Not Available | Negative | 490762 - 491142 | 14796.1 |
| protein-disulfide isomerase | SAMN03080610_00457 | Not Available | Negative | 491225 - 492043 | 29315.6 |
| putative zn-dependent protease, contains tpr repeats | SAMN03080610_00458 | Not Available | Negative | 492079 - 493524 | 51926.4 |
| aspartate/methionine/tyrosine aminotransferase | SAMN03080610_00459 | Not Available | Positive | 493612 - 494799 | 43001.6 |
| hypothetical protein | SAMN03080610_00460 | Not Available | Negative | 495069 - 495485 | 14956.2 |
| fatty-acyl-coa synthase | SAMN03080610_00461 | Not Available | Positive | 495627 - 497255 | 60316.5 |
| protein of unknown function | SAMN03080610_00462 | Not Available | Positive | 497269 - 498102 | 30021.1 |
| predicted arabinose efflux permease, mfs family | SAMN03080610_00463 | Not Available | Negative | 498133 - 499290 | 39266.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
