Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate kinase | SAMN03080610_00444 | Not Available | Positive | 476369 - 477583 | 43367.0 |
| putative dna-binding domain-containing protein | SAMN03080610_00445 | Not Available | Positive | 477764 - 478822 | 40448.3 |
| hypothetical protein | SAMN03080610_00446 | Not Available | Negative | 478849 - 479301 | 16755.2 |
| hypothetical protein | SAMN03080610_00447 | Not Available | Negative | 479298 - 479492 | 6885.23 |
| ribonucleoside-diphosphate reductase class ii | SAMN03080610_00448 | Not Available | Negative | 479637 - 483392 | 136487.0 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN03080610_00449 | Not Available | Negative | 483878 - 486052 | 80420.1 |
| acetyl esterase/lipase | SAMN03080610_00450 | Not Available | Negative | 486210 - 487082 | 31859.1 |
| 3-dehydroquinate dehydratase | SAMN03080610_00451 | Not Available | Positive | 487220 - 487672 | 16280.4 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | SAMN03080610_00452 | Not Available | Positive | 487675 - 488145 | 16743.9 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN03080610_00453 | Not Available | Positive | 488163 - 489527 | 48973.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
