Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted rna binding protein ycfa, dsrbd-like fold, hica-like mrna interferase family | SAMN03080610_00434 | Not Available | Positive | 465043 - 465231 | 6988.71 |
| predicted nuclease of the rnase h fold, hicb family | SAMN03080610_00435 | Not Available | Positive | 465228 - 465629 | 13998.7 |
| predicted arabinose efflux permease, mfs family | SAMN03080610_00436 | Not Available | Positive | 466098 - 467309 | 41815.2 |
| two component, sigma54 specific, transcriptional regulator, fis family | SAMN03080610_00437 | Not Available | Negative | 467392 - 468798 | 51873.4 |
| multi-sensor signal transduction histidine kinase | SAMN03080610_00438 | Not Available | Negative | 468795 - 470645 | 67460.7 |
| acetate coa/acetoacetate coa-transferase alpha subunit | SAMN03080610_00439 | Not Available | Positive | 471007 - 471660 | 22729.6 |
| acetate coa/acetoacetate coa-transferase beta subunit | SAMN03080610_00440 | Not Available | Positive | 471661 - 472317 | 22654.8 |
| short-chain fatty acids transporter | SAMN03080610_00441 | Not Available | Positive | 472454 - 473890 | 50794.5 |
| acetyl-coa c-acetyltransferase | SAMN03080610_00442 | Not Available | Positive | 474025 - 475206 | 40524.6 |
| phosphotransacetylase | SAMN03080610_00443 | Not Available | Positive | 475358 - 476299 | 32610.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
