Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell wall hydrolase | SAMN03080610_00424 | Not Available | Positive | 453054 - 453674 | 22221.2 |
| putative membrane protein | SAMN03080610_00425 | Not Available | Negative | 453909 - 454469 | 20754.6 |
| methyl-accepting chemotaxis protein | SAMN03080610_00426 | Not Available | Positive | 454856 - 457048 | 76684.3 |
| hypothetical protein | SAMN03080610_00427 | Not Available | Positive | 457309 - 458091 | 27386.6 |
| bifunctional isochorismate lyase / aryl carrier protein | SAMN03080610_00428 | Not Available | Positive | 458436 - 459095 | 24324.3 |
| uncharacterized conserved protein ybbk, duf523 family | SAMN03080610_00429 | Not Available | Negative | 459159 - 459650 | 16901.2 |
| choline-sulfatase | SAMN03080610_00430 | Not Available | Negative | 459658 - 461172 | 57337.9 |
| atp-binding cassette, subfamily b | SAMN03080610_00431 | Not Available | Positive | 461550 - 463481 | 69693.2 |
| spermine/spermidine synthase | SAMN03080610_00432 | Not Available | Positive | 463600 - 464337 | 26636.7 |
| methyltransferase domain-containing protein | SAMN03080610_00433 | Not Available | Positive | 464346 - 464999 | 24636.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
