Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | SAMN03080610_00393 | Not Available | Positive | 423844 - 424686 | 30489.3 |
| hypothetical protein | SAMN03080610_00394 | Not Available | Positive | 424691 - 424879 | 7174.66 |
| endonuclease, uma2 family (restriction endonuclease fold) | SAMN03080610_00395 | Not Available | Positive | 424887 - 425477 | 22444.9 |
| electron-transferring-flavoprotein dehydrogenase | SAMN03080610_00396 | Not Available | Negative | 425558 - 427222 | 60156.0 |
| dna polymerase | SAMN03080610_00397 | Not Available | Positive | 427412 - 428323 | 33383.1 |
| major facilitator superfamily protein | SAMN03080610_00398 | Not Available | Positive | 428472 - 429785 | 45861.1 |
| molybdenum cofactor biosynthesis protein b | SAMN03080610_00399 | Not Available | Positive | 429918 - 430460 | 19865.6 |
| hypothetical protein | SAMN03080610_00400 | Not Available | Negative | 430467 - 430958 | 17286.8 |
| dna repair photolyase | SAMN03080610_00401 | Not Available | Positive | 431243 - 432370 | 41751.3 |
| rnase hii | SAMN03080610_00402 | Not Available | Positive | 432593 - 433174 | 20141.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
